PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62032799-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 432aa MW: 47421.3 Da PI: 6.7642

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62032799-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.8	1.2e-38	139	197	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+++c+rC s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+ AUR62032799-RA 139 PDKIVPCARCSSMDTKFCYYNNYNVNQPRHFCKSCQRYWTAGGSMRNVPVGAGRRKNKN 197 7899*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MSENYDDFSI KLFGKTIQVG SNINEDFVGA SVFEPSSAAA DRDDFEYDCE STCDQNLLCS 60 KQDKIRGYEE NITKEANETK REEELSCTSV LDEPKTPTTP STDTEKPKTC TIPKKNQDQS 120 DQASSNNSES NDQNPLKKPD KIVPCARCSS MDTKFCYYNN YNVNQPRHFC KSCQRYWTAG 180 GSMRNVPVGA GRRKNKNPAA SHHRHLVIPG ASEGLIHQVM RPDGTVLAFG MDSHLNHSKD 240 SQNFISNGFF RSESENKNSV SFSNPNLISM KEANGNGGTI ESPQPVPCFP YSWNPVSWQS 300 GFPVSFYSTS SPQWGDSIAA GPCNLQWIPT QSLNSDQTRK SRVVMPKTLK ISDPVEASKS 360 SIWSALGVKN NNHNASSSIG RVAFFGGLQR AKDVNNYEMN NNASGVEASS LALQANPAAF 420 SRSLACHEVA Q*

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MSENYDDFSI KLFGKTIQVG SNINEDFVGA SVFEPSSAAA DRDDFEYDCE STCDQNLLCS  60
KQDKIRGYEE NITKEANETK REEELSCTSV LDEPKTPTTP STDTEKPKTC TIPKKNQDQS  120
DQASSNNSES NDQNPLKKPD KIVPCARCSS MDTKFCYYNN YNVNQPRHFC KSCQRYWTAG  180
GSMRNVPVGA GRRKNKNPAA SHHRHLVIPG ASEGLIHQVM RPDGTVLAFG MDSHLNHSKD  240
SQNFISNGFF RSESENKNSV SFSNPNLISM KEANGNGGTI ESPQPVPCFP YSWNPVSWQS  300
GFPVSFYSTS SPQWGDSIAA GPCNLQWIPT QSLNSDQTRK SRVVMPKTLK ISDPVEASKS  360
SIWSALGVKN NNHNASSSIG RVAFFGGLQR AKDVNNYEMN NNASGVEASS LALQANPAAF  420
SRSLACHEVA Q*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-62	Dof family protein