PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032801-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 301aa    MW: 33747.6 Da    PI: 8.4634
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032801-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.62.2e-1670115147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+++v+ +G+ +W++Ia+++  gR++k+c++rw++ 
   AUR62032801-RA  70 RGHWRPAEDSKLKELVAIYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 115
                      899*****************************.***********996 PP
2Myb_DNA-binding56.75.6e-18122165146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T+eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+ 
   AUR62032801-RA 122 RRAFTEEEEERLMQAHRVYGNK-WAMIARLFP-GRTDNAVKNHWHV 165
                      678*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGMSAFPDLT SLSLRKPSSF GAMPAASEQP TASKSRGFPF LGSFMIPRSD HTQINEEQEV  60
IEESSKVCAR GHWRPAEDSK LKELVAIYGP QNWNLIAEKL EGRSGKSCRL RWFNQLDPRI  120
NRRAFTEEEE ERLMQAHRVY GNKWAMIARL FPGRTDNAVK NHWHVIMARK YREQSSAYRR  180
RRNLIVHPQQ QPLPSSSSSF PNSYHLNHMX XXXXXXXMEE DEQIPSAYNG GVNNLINNNQ  240
SSSFPSNGNG FCGQQSPFDY FSDPYSLSSQ SSIGAAGGRS DDNPTSSSPP FIDFLGVGAT  300
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.11e-79MYB family protein