PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032850-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 486aa    MW: 52173 Da    PI: 6.5143
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032850-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.75.9e-34236292259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgynWrKYGqK+vkgse+prsYY+Ct+agCpvkkkvers  d++v+ei+Y+g+Hnh+
  AUR62032850-RA 236 DDGYNWRKYGQKQVKGSEYPRSYYKCTHAGCPVKKKVERSL-DGQVTEIIYKGQHNHQ 292
                     8****************************************.***************8 PP
2WRKY47.24.6e-154174552159
                     -EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY  21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      +sYY+Ct+agC+v+k+ver+a+dpk+v++tYeg+H+h+
  AUR62032850-RA 417 RKSYYKCTYAGCNVRKHVERAASDPKAVITTYEGKHDHD 455
                     469***********************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
MADNKDAPSS AKPPPAPPST SSQRPTITLP SRAGIESLFT GSGFGLSPGP MTLVSNFFSE  60
NDPDSDCRSF SQLLAGAIAS PRPPSEPDQV RFKDNRPSGL LISPPPQPPP QQGGAGGGGG  120
FFMLSPGISP ATLLDSPGLF PGQGPFGMSH QQALAQVTAQ AVQAQANLHM QGGFQSSLAL  180
GPSASEPFPG FAPDTSVQQN ITSSAHDSRD IKESAQVSGS DQRSNYSSII VDKPADDGYN  240
WRKYGQKQVK GSEYPRSYYK CTHAGCPVKK KVERSLDGQV TEIIYKGQHN HQPPQKRSKD  300
SGNNNENLGT QGNPESVSQP QASNLNSNSD SMAYSLPKRD QESSQATTEQ LSSDEEEVGN  360
GGTREADGDE DEPNAKRRIT EVRVTEQAAS HRTVTEPRII VQTTSEVDLL DDGYRWRKSY  420
YKCTYAGCNV RKHVERAASD PKAVITTYEG KHDHDVPAAR MSSHNTANSS SQLRPHNSAV  480
NTNSYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-122WRKY family protein