PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62032868-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 211aa MW: 23852.5 Da PI: 8.9504

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62032868-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.6	1.9e-12	68	113	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h + rrRRd++N++f L +++P K++K ++Le+A++Y+k+L+ AUR62032868-RA 68 HAITKRRRRDKLNQRFIALAKVIPCF-----DKMDKTSVLEEAIKYVKQLE 113 88899******************5.....5***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MESFQYSPTP SSESLSCCTT DDQDFGGIGV DGTLDRGGFE APKVNKGRGC NNRTGSMALN 60 FSLLSQYHAI TKRRRRDKLN QRFIALAKVI PCFDKMDKTS VLEEAIKYVK QLEERVKDLE 120 EQAKPRMVES AMLVKRTRET VDLESKKIAF PEIEAKVSNK DVLVRIYCKK QYGLLLLERI 180 LKEMDKVHLS INGTGLLSFG NHDLDITITA K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	78	RRRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-36	bHLH family protein