PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032882-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 190aa    MW: 21237.7 Da    PI: 4.7469
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032882-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.77e-191666155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s+y+GVr +k +g+Wv eIr+p   gk++r++lg+f+t e+Aa a++ a+  l+g
  AUR62032882-RA 16 SQYRGVRKRK-WGKWVTEIREP---GKKTRIWLGSFDTQEMAAIAYDVAAFHLRG 66
                    78*****999.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MEDSNSYVRS RGGIASQYRG VRKRKWGKWV TEIREPGKKT RIWLGSFDTQ EMAAIAYDVA  60
AFHLRGRGAV LNFPELADEL PCPASSRAED IRRAAQDAAA LQARGCINRY NMQAAQATAQ  120
PSYASSSSPM RVGLSPMQIQ AINESPLESP QMWSTMTDTQ MIDDSFFYNN DFEAVRGWED  180
EVPDDSLWD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.11e-45ERF family protein