PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62033098-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 424aa MW: 47626.2 Da PI: 8.135

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62033098-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.8	2e-14	68	166	2	90
FAR1 2 fYneYAkevGFsvrkskskks......krngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 fY +YA+e+GF+vr ++k++ + +g + + + Cskeg+ +++kk+ + ++++++r+ C ak+k + +dgk++v+ + + H+ AUR62033098-RA 68 FYYKYANECGFKVRSGTTKSQknkddpTGKGVTLIKYLLCSKEGYVTNNKKSgkqvEGACLKRKTVKRVCCPAKIKFRFCNDGKYMVYCFYESHS 162 9***********9887777444444445667788899****999996544444456999**************************** PP FAR1 87 Hela 90 H+++ AUR62033098-RA 163 HPFS 166 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MSESVEHCSS SVTTEDSNVR IFKTPTQPLL SKIYYNFGGD KEYMPCCSSE NKPFLGMIFD 60 SLQDGIAFYY KYANECGFKV RSGTTKSQKN KDDPTGKGVT LIKYLLCSKE GYVTNNKKSG 120 KQVEGACLKR KTVKRVCCPA KIKFRFCNDG KYMVYCFYES HSHPFSTPIT RQHAADIYTR 180 AIFYDFQEEC QGPCFSCGVE SCSSLYGDGV EFSVIVDHEK RKNFDVNFDL ATYESSCTCR 240 MFESQGVLCR HILFVMKVKC VREIPDAYIL NRWRKDVLKK ASVIDVALDD ASKYDKKKQL 300 VSILWSNIFS CVSLTDQSED DLSELIKTLS LFEEQVISKN IPENAPSSKE VEDADIQVLV 360 GSNEVDVNVL PPNQCINKGS ARSSKRLKSA KEIATEEKSK KGRTCRACGQ SGVSHDSRNS 420 PNK*

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MSESVEHCSS SVTTEDSNVR IFKTPTQPLL SKIYYNFGGD KEYMPCCSSE NKPFLGMIFD  60
SLQDGIAFYY KYANECGFKV RSGTTKSQKN KDDPTGKGVT LIKYLLCSKE GYVTNNKKSG  120
KQVEGACLKR KTVKRVCCPA KIKFRFCNDG KYMVYCFYES HSHPFSTPIT RQHAADIYTR  180
AIFYDFQEEC QGPCFSCGVE SCSSLYGDGV EFSVIVDHEK RKNFDVNFDL ATYESSCTCR  240
MFESQGVLCR HILFVMKVKC VREIPDAYIL NRWRKDVLKK ASVIDVALDD ASKYDKKKQL  300
VSILWSNIFS CVSLTDQSED DLSELIKTLS LFEEQVISKN IPENAPSSKE VEDADIQVLV  360
GSNEVDVNVL PPNQCINKGS ARSSKRLKSA KEIATEEKSK KGRTCRACGQ SGVSHDSRNS  420
PNK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-16	FAR1 family protein