PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033188-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YB
Protein Properties Length: 174aa    MW: 19857.8 Da    PI: 6.343
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033188-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB176.42.8e-5565160297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdr+lPianv+rimk++lPanakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal++lGf++y++plk yl++yre+ege
  AUR62033188-RA  65 KEQDRLLPIANVGRIMKHILPANAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALSSLGFDEYADPLKRYLHRYREFEGE 159
                     89*******************************************************************************************99 PP

           NF-YB  97 k 97 
                     +
  AUR62033188-RA 160 R 160
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MVDNITSSYS NRSLLPNYNP TPTSSSSQQH HGNYNQNIYH EGSNIRNSNE HDDHEHEDQA  60
LGTIKEQDRL LPIANVGRIM KHILPANAKI SKEAKETMQE CVSEFISFVT GEASDKCHKE  120
KRKTVNGDDI CWALSSLGFD EYADPLKRYL HRYREFEGER VANQNKEREN IHG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.12e-62NF-YB family protein