PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033225-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 246aa    MW: 27332.4 Da    PI: 9.0071
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033225-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2483.2e-1566115355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  AUR62033225-RA  66 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 115
                     9***************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
GYDKEEKAAR AYDLAALKYW GPTTTTNFPI SDYEKELDQM KDMSRQEFVA SLRRKSSGFS  60
RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT  120
NFDISRYDVK SIISSNLPVG GLSNKSKSLP DHEEIKTLKA IKPELPLIPA LPHHQSSTTY  180
NHNFIGMPLK LDSSSQNYNN WPALGQVENN EAALGYTNYG YVQQQPNGND SVSPATNGYD  240
GKLTF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.15e-90AP2 family protein