PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62033426-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 405aa MW: 43607.1 Da PI: 6.6113

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62033426-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	51.7	2e-16	255	284	27	56
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRla 56 AtPk+i+elmkv+gLt+++vkSHLQkYRl+ AUR62033426-RA 255 ATPKQIRELMKVDGLTNDEVKSHLQKYRLH 284 9***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MMASPSELSL DCKPQSYSML LKSFGGAGDH NNQTDQATNK LEEYLNRLEE ERHKIDAFKR 60 ELPLCMQLLT NAMEASRQQL QSFRINNQGA RPVLEEFMPL KHSNLEGSDQ KTANISDKAN 120 WMVSAQLWSP AGDANKQQSS TLPKSEADTG FSVSSPKLGL DTNQRNGGAF LPFAKERNSV 180 PNNSNIRPLP DLALASSDRE VDDKSENGLS GSRSDNSSKG GNAIVGMAST DSQAPIATTT 240 TTTTTQTNRK ARRLATPKQI RELMKVDGLT NDEVKSHLQK YRLHTRRPSP SPQAVGGQAP 300 QLVVLGGIWV PPEYATAAAA AHGGAPTIYS AHPSTQTTSH TQTHSSPESD AQRAGDRSES 360 IEDGKSDCSS WKGESGENGG EGRKLAALRD DGEESNGSQI TLKF*

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MMASPSELSL DCKPQSYSML LKSFGGAGDH NNQTDQATNK LEEYLNRLEE ERHKIDAFKR  60
ELPLCMQLLT NAMEASRQQL QSFRINNQGA RPVLEEFMPL KHSNLEGSDQ KTANISDKAN  120
WMVSAQLWSP AGDANKQQSS TLPKSEADTG FSVSSPKLGL DTNQRNGGAF LPFAKERNSV  180
PNNSNIRPLP DLALASSDRE VDDKSENGLS GSRSDNSSKG GNAIVGMAST DSQAPIATTT  240
TTTTTQTNRK ARRLATPKQI RELMKVDGLT NDEVKSHLQK YRLHTRRPSP SPQAVGGQAP  300
QLVVLGGIWV PPEYATAAAA AHGGAPTIYS AHPSTQTTSH TQTHSSPESD AQRAGDRSES  360
IEDGKSDCSS WKGESGENGG EGRKLAALRD DGEESNGSQI TLKF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	4e-91	G2-like family protein