PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033547-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRF
Protein Properties Length: 269aa    MW: 28793.8 Da    PI: 8.1103
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033547-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC45.81e-1496121126
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkk 26 
                     d+epgrCrRtDGKkWRCsr+v++g+k
  AUR62033547-RA  96 DPEPGRCRRTDGKKWRCSRDVVAGHK 121
                     79**********************98 PP
2QLQ49.21.6e-172358237
             QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                    +F+ aQ+q+L+ Q+l+y++++a++ vP+eLlq ++k
  AUR62033547-RA 23 SFSLAQWQELELQALIYRHMVAGASVPAELLQLVKK 58
                    8*******************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MTAFWVLTIF SVIVKIGAGG RYSFSLAQWQ ELELQALIYR HMVAGASVPA ELLQLVKKSL  60
FTSSAAPYYL HHYSPHFQPA AALVLQAGYW GKGAMDPEPG RCRRTDGKKW RCSRDVVAGH  120
KSSDNKTLFG PQHESSSGSG DGGNSNTNSS KVLMQFFDDW PRSDNGEGNT LSSSTGLSIS  180
TPGNPTSDFL RLSTGNGDEQ GRRDSNENDG RERAHQLNWS AGGWGANPVA SMGGPLAEAL  240
RSSSNSSPTS VLHQLPRCSA PDNSFVSA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52910.19e-30GRF family protein