PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62033646-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

CPP

Protein Properties

Length: 726aa MW: 79383.2 Da PI: 6.5046

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62033646-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.1	2.7e-16	428	466	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk AUR62033646-RA 428 SCKRCNCKKSKCLKLYCECFAAGVYCVEPCSCQDCFNKP 466 689**********************************96 PP
2	TCR	51	2.9e-16	513	551	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN AUR62033646-RA 513 RHKRGCNCKKSNCLKKYCECYQGGVGCSINCRCEGCKNA 551 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
MESPFSNFIN SLSPINPTKT IHVSQTFGSL SFTSPPSVFT SPHVSFQKDN KFLRRHLVSD 60 LARHQLSIDE GNKDSITEED GSTEHHPESL PNVQIRGDGG EGSAKPLEDA SDCAAELPRE 120 LKYDSGSPRH CEAVNSSGNE TRSEPDTSVA LIQFIQEPSD RGSFETESNA KETNHDNEEE 180 GCDWQSLISG SSDLFIFDSP NVTETSKGSL PKSQEEETNV FASLLARFPS EQAYDLQTSL 240 QVGSASCHEA HEIREQSTQP TEATEMNQID QPSENLESAS VNELFSGEKP GKQPFSSIHR 300 GLRRRCLTFE MPRTKRSIDS VLFSTSMASL PNEENPPSNR QPITPRVDPA KRIMPGIGLH 360 LNALAGVSKG SGISNQELLS TNTQDPLTNS LTSLREDVGP AENIVEMAED SSQASVRKFE 420 TIGEGESSCK RCNCKKSKCL KLYCECFAAG VYCVEPCSCQ DCFNKPIHEE TVLATRKQIE 480 SRNPLAFAPK VIRTADSAQE VGEDTTRTPA SARHKRGCNC KKSNCLKKYC ECYQGGVGCS 540 INCRCEGCKN AFGRKDGSNL IGTEAEMEKI QASEKSVQDK TSDIHAFHND EGQHSEFAIP 600 MTPSRLFRQS IPVATSSKGK PPRSSLGMIT SSSGLHQVDG PGRSTFLRTL SRPEKHFKSV 660 ADEIPTVLQN CSPPSSGLKT LSPNSKRISP PHHANRQTFG HRSSQSSRKL ILQSIPAFPS 720 LSPRR*

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

MESPFSNFIN SLSPINPTKT IHVSQTFGSL SFTSPPSVFT SPHVSFQKDN KFLRRHLVSD  60
LARHQLSIDE GNKDSITEED GSTEHHPESL PNVQIRGDGG EGSAKPLEDA SDCAAELPRE  120
LKYDSGSPRH CEAVNSSGNE TRSEPDTSVA LIQFIQEPSD RGSFETESNA KETNHDNEEE  180
GCDWQSLISG SSDLFIFDSP NVTETSKGSL PKSQEEETNV FASLLARFPS EQAYDLQTSL  240
QVGSASCHEA HEIREQSTQP TEATEMNQID QPSENLESAS VNELFSGEKP GKQPFSSIHR  300
GLRRRCLTFE MPRTKRSIDS VLFSTSMASL PNEENPPSNR QPITPRVDPA KRIMPGIGLH  360
LNALAGVSKG SGISNQELLS TNTQDPLTNS LTSLREDVGP AENIVEMAED SSQASVRKFE  420
TIGEGESSCK RCNCKKSKCL KLYCECFAAG VYCVEPCSCQ DCFNKPIHEE TVLATRKQIE  480
SRNPLAFAPK VIRTADSAQE VGEDTTRTPA SARHKRGCNC KKSNCLKKYC ECYQGGVGCS  540
INCRCEGCKN AFGRKDGSNL IGTEAEMEKI QASEKSVQDK TSDIHAFHND EGQHSEFAIP  600
MTPSRLFRQS IPVATSSKGK PPRSSLGMIT SSSGLHQVDG PGRSTFLRTL SRPEKHFKSV  660
ADEIPTVLQN CSPPSSGLKT LSPNSKRISP PHHANRQTFG HRSSQSSRKL ILQSIPAFPS  720
LSPRR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-108	CPP family protein