PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033996-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 250aa    MW: 28716.6 Da    PI: 6.5157
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033996-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.6e-1159101754
                     HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       Er+RR+++N+ + +Lr ++P  +      K++Ka+i + A++YIk+L
  AUR62033996-RA  59 VSERNRRKKLNEQLYNLRAVVPIiS------KMDKASIIKDAINYIKEL 101
                     57*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MDSFVEEYPL YWGTADIGMY FDNQDFDSLG LDETLSSYYD YDSSSPDGCA SSMASKNIVS  60
ERNRRKKLNE QLYNLRAVVP IISKMDKASI IKDAINYIKE LHEQERRIKS DISDLEYRRS  120
KNGIDNTCSM MDYEQELSGL LIKSKKKRTD HRKQHYDSNG CCRTSIDDLE VRVSYVGERT  180
IVVSLTCSKR EGTMVKLCEM FESLKLKIIT AHITAFAGRL LKTVFLEADE LEKDHLRRKI  240
ETVISSTHV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-61bHLH family protein