PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034268-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 336aa    MW: 38788.4 Da    PI: 5.6737
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034268-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.51.7e-1685189290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.................tekerrtraetrtgCkaklkvkkekdgkwevt 79 
                      Y++++++vGFsvrks++++   n+++++  + Cske +++ + k                  ++++ r+ +etrtg ka+++ kk+k+g++ev 
  AUR62034268-RA  85 LYKAHSRSVGFSVRKSTKRRD-SNDKMYEFYLICSKERYTKGKMKIateqntveipllgktdaKKRKDREVNETRTGYKAHIRFKKNKEGNFEVV 178
                     59**************99998.5566***********9999887778999**********988888888999*********************** PP

            FAR1  80 kleleHnHela 90 
                     + eleHnHel+
  AUR62034268-RA 179 THELEHNHELV 189
                     *********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MEKSNNKMMI EGDSDSPIES ISSSITAEKA DNVILGDNIN EERDDEERDE DAASIIDYYK  60
YDKDENISKC LASYTVSNYN EGYVLYKAHS RSVGFSVRKS TKRRDSNDKM YEFYLICSKE  120
RYTKGKMKIA TEQNTVEIPL LGKTDAKKRK DREVNETRTG YKAHIRFKKN KEGNFEVVTH  180
ELEHNHELVI AVQRHHLRSE RQILAPMGEL IESMIESGIK PMDAYNYISN EAGGEECVGH  240
TKRDHLNYVS RVKMSMVEGG DMQNVLDTLQ ERADQDPSFF YRLKFGEENN VVRYFWRDSQ  300
MLEDFKAFGD VLIFDTTYRT NKYGLICAPF VGHLS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-35FAR1 family protein