PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034337-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 622aa MW: 70666.3 Da PI: 9.0851

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034337-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.5	1.9e-07	131	177	2	47
FAR1 2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk 47 Y+++A vGFsvrk+k++++ +++ itk+ fvCs g r++ k + AUR62034337-RA 131 LYCQHAVAVGFSVRKAKQTSKiGTKDIITKKFFVCSAAGLRNSAKLN 177 79***********99998866777799999*****99987755 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MGKRKPEAVA QLYAEPEAWS EVSAPEIAAP RTATPKKAAP RTPAQAAAAV AREAVAAAKD 60 TIENFDINVI NFDLNEAVED EEQTIIEAED ENKVHEENQP LMQAQGESNN DEISGWLVGK 120 TRATLAEIHE LYCQHAVAVG FSVRKAKQTS KIGTKDIITK KFFVCSAAGL RNSAKLNEEG 180 KFEIVQHVLV HNHPLTRPQW NHFHRLERAM TGIKGQVIEA MQESRLRPME SFNYMLNEAG 240 GEDSIGHTVK GHMNYCYKLK IKAIEGGDSQ VVCDKLQEAY SEDPNFFFRV RLYSLKHKWS 300 TALSKDFFFA GILSSQRSES TNHAVGFKAN KKTSLTEFYN IFQKTVKTWR RNEDFYEFNS 360 IKSIPTSSYP MSALLKHVAE VNTHTLFRDF EEEFNLAIGS QTKLLFINGG KMVYQVYIEG 420 RDGTTQEVTY APINQTIQCP CKNFEESGWL CFHSLRILHM HSVEKIPKQY ISFRWTKMAK 480 DKVWESMEAE QRMKGALNSF RPWRLHMVRK YYSLILKSHK FEQARKVLEE SFAKDLSAID 540 EIISVMKSTD NHSENTTGVE ENSEATSSSV VQVLDPARAK TKGGQSNKKI PGIYGYMKKG 600 KRRKHREFGA KTPNINNKYM L*

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MGKRKPEAVA QLYAEPEAWS EVSAPEIAAP RTATPKKAAP RTPAQAAAAV AREAVAAAKD  60
TIENFDINVI NFDLNEAVED EEQTIIEAED ENKVHEENQP LMQAQGESNN DEISGWLVGK  120
TRATLAEIHE LYCQHAVAVG FSVRKAKQTS KIGTKDIITK KFFVCSAAGL RNSAKLNEEG  180
KFEIVQHVLV HNHPLTRPQW NHFHRLERAM TGIKGQVIEA MQESRLRPME SFNYMLNEAG  240
GEDSIGHTVK GHMNYCYKLK IKAIEGGDSQ VVCDKLQEAY SEDPNFFFRV RLYSLKHKWS  300
TALSKDFFFA GILSSQRSES TNHAVGFKAN KKTSLTEFYN IFQKTVKTWR RNEDFYEFNS  360
IKSIPTSSYP MSALLKHVAE VNTHTLFRDF EEEFNLAIGS QTKLLFINGG KMVYQVYIEG  420
RDGTTQEVTY APINQTIQCP CKNFEESGWL CFHSLRILHM HSVEKIPKQY ISFRWTKMAK  480
DKVWESMEAE QRMKGALNSF RPWRLHMVRK YYSLILKSHK FEQARKVLEE SFAKDLSAID  540
EIISVMKSTD NHSENTTGVE ENSEATSSSV VQVLDPARAK TKGGQSNKKI PGIYGYMKKG  600
KRRKHREFGA KTPNINNKYM L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-20	FAR1 family protein