PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034343-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 180aa    MW: 20233.7 Da    PI: 4.5705
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034343-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.25.5e-151564255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g++ AeIr p   gkr  ++lg+f+taeeAa  +++a + ++g
  AUR62034343-RA 15 KYRGVRQCP-WGKYIAEIRYP---GKRSAVWLGTFDTAEEAAMIYDKATLLIRG 64
                    8********.**********8...557*******************99777666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MRQSGKRVQN ENIRKYRGVR QCPWGKYIAE IRYPGKRSAV WLGTFDTAEE AAMIYDKATL  60
LIRGPHAKTN FYLPAVPVNG VPSLSGEIEK KDEVAPRLCL TSSVLRCHQG GDDELEISWF  120
LNGLFSYDDA PKTLLDVYNF VPDYTSSEYG RLEDLNGDFD LEGPDNPLST NCEVDDYLL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.11e-24ERF family protein