PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034392-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 179aa    MW: 20685.7 Da    PI: 10.3895
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034392-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.94.7e-2035131390
            FAR1   3 YneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                     Y+++A  +GF vr+s+++ +  +n++i+ ++fvCskeg+r + k +        ++k+ r+ + trtgCka ++ kk+k+gk+e+++ + +HnH+
  AUR62034392-RA  35 YKKHAFVLGFGVRQSTTRWTlGENKQIKGKDFVCSKEGFRCKPKVQktpppvneNRKKTRQVPLTRTGCKAFIRAKKNKEGKFEIEEHVINHNHD 129
                     9*************999988799999**************98887789***9877778888899******************************* PP

            FAR1  89 la 90 
                     l+
  AUR62034392-RA 130 LT 131
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MQTQQSKGQQ QEDFDFTGSL IGYTAETLDE IHEKYKKHAF VLGFGVRQST TRWTLGENKQ  60
IKGKDFVCSK EGFRCKPKVQ KTPPPVNENR KKTRQVPLTR TGCKAFIRAK KNKEGKFEIE  120
EHVINHNHDL TRKAWQHLHR SERKITEDKA KVIDFMAESG LKPTEAYNLM TKGMHKQL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-13FAR1 family protein