PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034420-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ZF-HD
Protein Properties Length: 227aa    MW: 24316.6 Da    PI: 10.2866
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034420-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1116.3e-354197459
     ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59
                    v YkeClkNhAaslGgha+DGCgEfmp+++++ +++++lkCaACgCHRnFHRre+ee
  AUR62034420-RA 41 VLYKECLKNHAASLGGHALDGCGEFMPAPTATaSDPTSLKCAACGCHRNFHRREPEE 97
                    78***************************99999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
LSIVPPSKSP EAESETPPRI QSSKPLSFSN GVLKRHAPAI VLYKECLKNH AASLGGHALD  60
GCGEFMPAPT ATASDPTSLK CAACGCHRNF HRREPEETVN ATTPLTHVIE YHPHHRHHPL  120
PPPASNPQTA PAVATRGVRS PGSQSPPPIS SSYYPGSAPH MLLALSSGGV GATTASDELI  180
LITTAKPKAV PNQIQPRSKR PNARIRRKSR VENAENKRRF SEWVLQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39760.12e-39ZF-HD family protein