PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034427-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 513aa MW: 56455 Da PI: 5.4769

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034427-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.8	2.8e-39	155	215	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grr+nk+s AUR62034427-RA 155 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRRNKNSV 215 7899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MAETKDPAIK LFGKTIPLQE IPLNSPVNWS PPTDAIDVAN DDDNDEDGDE IDTEDMDENG 60 MFLYAVDLIP LASIVHQILG LKILINHDGK TFQTKQVRVS PEVSDTSTCQ AASLGCTDNL 120 GPLSGAKEKA SGESLNLEEE KTEMNLSQDM TPKKPDKILP CPRCNSMDTK FCYYNNYNVN 180 QPRHFCKNCQ RYWTAGGTMR NVPVGAGRRR NKNSVSHHRQ VNIPEAFHNT QPDIPNVFHP 240 VLPNNGTVLS FSSDVPLCES MASILNLTEK TEKNCSRNGF QKPEELKIPN RFGGLEHGGN 300 DFDGSNSNDY ASKLALNESV APNSLPFPQI LCYPGAPWPY PWNSTQWNPI AAPPFCPNGF 360 AIPFYHVAPY WGYNVPGTWN IPLTAQPSQV SHSNSSSGPN SPLGKHSRDG TMLSPTKSEE 420 KEIEETGSER SIWIPKTLRI DDPGEVAKSS IWKTLGKKNS EKPVTIGRGS GLFKAFQSKS 480 DEGNDPHMET SPVLQANPAA LSRTQNFQEN TK*

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MAETKDPAIK LFGKTIPLQE IPLNSPVNWS PPTDAIDVAN DDDNDEDGDE IDTEDMDENG  60
MFLYAVDLIP LASIVHQILG LKILINHDGK TFQTKQVRVS PEVSDTSTCQ AASLGCTDNL  120
GPLSGAKEKA SGESLNLEEE KTEMNLSQDM TPKKPDKILP CPRCNSMDTK FCYYNNYNVN  180
QPRHFCKNCQ RYWTAGGTMR NVPVGAGRRR NKNSVSHHRQ VNIPEAFHNT QPDIPNVFHP  240
VLPNNGTVLS FSSDVPLCES MASILNLTEK TEKNCSRNGF QKPEELKIPN RFGGLEHGGN  300
DFDGSNSNDY ASKLALNESV APNSLPFPQI LCYPGAPWPY PWNSTQWNPI AAPPFCPNGF  360
AIPFYHVAPY WGYNVPGTWN IPLTAQPSQV SHSNSSSGPN SPLGKHSRDG TMLSPTKSEE  420
KEIEETGSER SIWIPKTLRI DDPGEVAKSS IWKTLGKKNS EKPVTIGRGS GLFKAFQSKS  480
DEGNDPHMET SPVLQANPAA LSRTQNFQEN TK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-81	Dof family protein