PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034487-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YA
Protein Properties Length: 241aa    MW: 27065.3 Da    PI: 8.2171
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034487-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA416.1e-13142174133
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldek 33 
                     d p+YVN+KQy++I++RR++Rak   +++ +++
  AUR62034487-RA 142 DGPIYVNPKQYHGIMRRRKMRAKEGLKNRSTKD 174
                     57**********************999997333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MQKSGTNRQI SSIGSMPWWV AAGSQDEMNS SNLNQIDWIG EHQKSEHIMN GASEKEKQGV  60
FHFSFSAEDN KNSIKENNGR DHQINSFQQF PLPQQKNYVE LGLGQPMVYA NHPLDQCHGL  120
YAVYGTQPAG RAMLPFSVAT EDGPIYVNPK QYHGIMRRRK MRAKEGLKNR STKDKEVSDC  180
KSPNFSGSEV TSMYYSKDFD CFGINPGRPF AFHPLQNMEG NRQGSNWVTA VDGCCNLFKV  240
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156161MRRRKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.21e-20NF-YA family protein