PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034506-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 246aa    MW: 26949.1 Da    PI: 6.1115
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034506-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.7e-051251631255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  AUR62034506-RA 125 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 163
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MSSPISSSSS TIDPQMANNA QNGFDLFATA RFLSGETLNN HSSSGNNLLE LFEGSPRFNV  60
DHDLQQSNDL KLCNIPNNNL SSFNNNNGVP ADSKNYIMEQ QSTHQMPSKK PRFEPRASCP  120
PFKVRKEKLG DRIAALQQLV APFGKTDTAS VLMEAIGYIK FLQNQVETLS VPYMKSSSHN  180
KSSNTTQRVK DDEFCVSDES ILTDDLRSRG LCLVPQSCMS YINLASDATI NGGIWPSPNF  240
NPAGF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.16e-46bHLH family protein