PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034516-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 189aa MW: 21252.4 Da PI: 6.2353

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034516-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.7	5.2e-13	30	87	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ +r+++NRe+ArrsR RK++ ie L v++L+ eN + ++ + +++ ++++e AUR62034516-RA 30 RKRKRMASNRESARRSRMRKQKHIEDLMVQVDQLKRENNQILQTTNLTTQQFVNVEAE 87 6789***********************************9998888887776666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MASSSNNSAT SSQIQNSGSE GDLQQMMDER KRKRMASNRE SARRSRMRKQ KHIEDLMVQV 60 DQLKRENNQI LQTTNLTTQQ FVNVEAENSV LKAQMNELNQ RLQSLNDILN YMNTLTTGIN 120 GNGHGHGNTA FEDHSLDISH DDLGDFGFIN GYYGNFTHNT NNVIGANNPW NLVYLNQPIM 180 ASADVLQY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	51	RKRKRMASNRESARRSRMRKQK
2	43	50	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	3e-33	bZIP family protein