PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034552-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

SRS

Protein Properties

Length: 163aa MW: 16857.6 Da PI: 5.6969

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034552-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	92.3	1e-28	16	87	83	154
DUF702 83 qsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++ ++s l+ a+++ le+ ++P+ev+s+avfrcvrvs +dd +e++aYqtav+igGh+fkGiLydqG+e+ AUR62034552-RA 16 ENRSNSRVLTAANTTAGLEVGNFPPEVNSPAVFRCVRVSPIDDPDEQFAYQTAVNIGGHLFKGILYDQGPET 87 444455566778888999****************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MMRPSVGIGG EKRTRENRSN SRVLTAANTT AGLEVGNFPP EVNSPAVFRC VRVSPIDDPD 60 EQFAYQTAVN IGGHLFKGIL YDQGPETRYG SGGGGGESSS GGRSQQHGLM LTAATTTTDL 120 MGTVGSGSTN NNATTATATA SLLDPMGTNN SSIYPTPINA FLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	8e-30	SRS family protein