PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034624-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 393aa    MW: 44004.1 Da    PI: 5.2415
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034624-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.81.7e-08127225286
            FAR1   2 fYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk...........tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 
                     ++++Y ++ GF v++s+  ++   ++ +e  + t++C + g + +++kk           +++   +r++++++C  kl  k ++ g+w+++k  
  AUR62034624-RA 127 YFKNYREQEGFGVVRSSGATKgkdENAKEKLNITWTCECFGLPGRKSKKsdstfvsdsqiSDEVCVKRKSKKVSCPMKLYAKINEVGEWVIDKAL 221
                     89*************998877655777888999********9999998889999988776666666***************************99 PP

            FAR1  83 leHn 86 
                      eH 
  AUR62034624-RA 222 VEHQ 225
                     9995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MARKMLVMED SLLTNDDEEG GGRYTGILSD CDTAAIEDPE DLAAIEDPED PLIETREQED  60
DDEQCSLALE ALLKEVNVGE ESYKTPTKGK SSVAISIEIE ECENVKVSLP PLAVGMVFES  120
WQKIDTYFKN YREQEGFGVV RSSGATKGKD ENAKEKLNIT WTCECFGLPG RKSKKSDSTF  180
VSDSQISDEV CVKRKSKKVS CPMKLYAKIN EVGEWVIDKA LVEHQGHKPT PGKSKNITKF  240
KQKFLMDNPH IVQQLLNDRK AGVPGNCDGV QEDVPVKDPP LLKRPAHRTT DSRYLILKSF  300
QNMVPYRPQC VGGIQMLDGE GSIGYFTSVG DGAQQSYGFQ ISPQHGFYFR ILNFLKIRFL  360
MGCMDGTRLI HLYQLHQDKQ GKFPYYLDLG CL*