PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034734-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YB
Protein Properties Length: 211aa    MW: 23027.3 Da    PI: 7.9285
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034734-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB87.31.7e-27189896
           NF-YB  8 lPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96
                    +P+  v+ ++ ++lP+ akis +aket+q+c++efi+f+ +ea+d  + + r    +ddl+ a+ +lGf++yvepl++ +++yre++g+
  AUR62034734-RA  1 MPVVYVICVICRALPSTAKISIKAKETIQKCIAEFIGFILNEANDIRKVDYRMVTIADDLVEAMYKLGFDHYVEPLRTLIRRYREVKGK 89
                    79999************************************************999******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MPVVYVICVI CRALPSTAKI SIKAKETIQK CIAEFIGFIL NEANDIRKVD YRMVTIADDL  60
VEAMYKLGFD HYVEPLRTLI RRYREVKGKD NTQAQQMRLY KPILLELAVI VSPLAVKSTT  120
TTPMKEMNYN GGSSSNNDNG VDQYVDHGYG NVINGTTMMN FNGGSSSNNN RSSSNSIGGG  180
RVEYVNHGCG VGVIGGGVID NTTVINYDIV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.17e-26NF-YB family protein