PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034813-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 229aa    MW: 26462.8 Da    PI: 7.32
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034813-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1111.4e-34141461128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgk...rknratksgyWkatgkdkev 92 
                     lppGfrF+Ptdeel+ +yL+ k+ + +l++ ++i+ev+ +k++Pw+Lp     + +e y F+k+  ++++ +   r+ rat+ gyW++tg++ ++
  AUR62034813-RA  14 LPPGFRFQPTDEELLFQYLRCKIFSLPLPA-SIIPEVHSLKLDPWELPG---DSMEERYVFTKKGGRHKKRNqinRSIRATNLGYWEETGSEMHI 104
                     79****************************.89***************3...356799****98766665441126667899************* PP

             NAM  93 lsk..kgel......vglkktLvfykgrapkgektdWvmheyrl 128
                          +  +      +g+kktLv++ grap+g+ tdW m+ey+l
  AUR62034813-RA 105 SPPpsQ--NfetmmmMGIKKTLVYHMGRAPSGSPTDWYMNEYSL 146
                     998550..3445556***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MKKHNFVGEN LNRLPPGFRF QPTDEELLFQ YLRCKIFSLP LPASIIPEVH SLKLDPWELP  60
GDSMEERYVF TKKGGRHKKR NQINRSIRAT NLGYWEETGS EMHISPPPSQ NFETMMMMGI  120
KKTLVYHMGR APSGSPTDWY MNEYSLVYNN KNNKGVSKME DWVIWHVFLK QRIEGNDDAI  180
MLDYNNSHYR LTSNISSPCS SSSSSSNSFA HVSSYELHSD EESSYNFM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.13e-44NAC family protein