PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034836-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NF-YC

Protein Properties

Length: 242aa MW: 25822.5 Da PI: 6.8019

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034836-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	172.2	5.6e-54	1	102	4	102
NF-YC 4 sfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 +fw++q ie+a+dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdi AUR62034836-RA 1 MFWSYQrqeIETANDFKNHSLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDI 95 5898887789*********************************************************************************** PP NF-YC 96 vprdelk 102 vprde+k AUR62034836-RA 96 VPRDEIK 102 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MFWSYQRQEI ETANDFKNHS LPLARIKKIM KADEDVRMIS AEAPILFAKA CELFILELTI 60 RSWLHAEENK RRTLQKNDIA AAITRTDIFD FLVDIVPRDE IKDEAAGLGM VGGIVGPTGV 120 SPPPGVGVPT ASGVSYYYPP MGQPAPPGVM IGRPAMDPAG LYGVSGPSPP SSAWQSVWQS 180 GHAAGNDGSY GSAASGGGIM ARVASMARGF SFSLENLSSN VTELAVKRSV RGWRVDKIVA 240 D*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	77	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	7e-91	NF-YC family protein