PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62034976-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 362aa MW: 40676.6 Da PI: 7.1904

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62034976-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.6	9.4e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++++ G+g +W + ++++g++R++k+c++rw++yl AUR62034976-RA 14 KGPWSPEEDAKLKSYIEKNGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	39.2	1.7e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd +++ + G++ W+ Ia+ ++ gRt++++k++w++ AUR62034976-RA 69 GGFSEEEDRIILSLYVSIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDRIIL SLYVSIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRRDQQQARK ANNLLKKQED NRLVYSIPFT SSFVNHNQIP YWPPQLTTNL PSAISIPNYL 180 NSSSENFQGL NNDHTSLRKL LMKVNGGHYD SVNDPQLLPH HNITYPSDNN ITQTNINLSN 240 TTPPLDTMIH TCEITSSSHF NPEGEGVRIG MMEGQSSTFP PELEELMSRN PQRVAADGLE 300 FLYGDYGNNF VNNDGSTSDT TTCGESSRWV EMSSLASLPN LESDCSVLVQ GIGEESRFEE 360 PL

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDRIIL SLYVSIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRRDQQQARK ANNLLKKQED NRLVYSIPFT SSFVNHNQIP YWPPQLTTNL PSAISIPNYL  180
NSSSENFQGL NNDHTSLRKL LMKVNGGHYD SVNDPQLLPH HNITYPSDNN ITQTNINLSN  240
TTPPLDTMIH TCEITSSSHF NPEGEGVRIG MMEGQSSTFP PELEELMSRN PQRVAADGLE  300
FLYGDYGNNF VNNDGSTSDT TTCGESSRWV EMSSLASLPN LESDCSVLVQ GIGEESRFEE  360
PL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-76	MYB family protein