PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035340-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 181aa    MW: 20616.5 Da    PI: 7.942
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035340-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR141.44.8e-1392169270
            FAR1   2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk........tekerrtraetrtgCkaklkvkk 70 
                      Y+++A  +GF vr+s+++++  + ++i+ ++fvCskeg+r + k +        ++k+ ++ + trt+Cka ++ kk
  AUR62035340-RA  92 VYQKHAFAIGFGVRQSTTRYTqGEPKTIKGKDFVCSKEGFRVKPKVRktppppnqKQKRVKQVPITRTSCKAFIRAKK 169
                     7**************999888356678899***********98887789***987777778999**********9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MAESSEYFQP EESENFQPML EIFPESQESM EIEEIGDSLM NLGIDNRNNN ELPESSKSTM  60
TEESKHDDQH ELDYTGCLVG FTAKTLNEIY EVYQKHAFAI GFGVRQSTTR YTQGEPKTIK  120
GKDFVCSKEG FRVKPKVRKT PPPPNQKQKR VKQVPITRTS CKAFIRAKKI VMVCLKLKSI  180
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