PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035366-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 178aa    MW: 20030.3 Da    PI: 6.5032
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035366-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.86.9e-202572148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd ll+++vk++G g+W+++ar  g++R +k+c++rw +yl
   AUR62035366-RA 25 KGPWTAEEDRLLIEYVKLHGEGRWNSVARLAGLRRNGKSCRLRWVNYL 72
                     79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MSCRGVMGAH MGMSWGMLGD GGWRKGPWTA EEDRLLIEYV KLHGEGRWNS VARLAGLRRN  60
GKSCRLRWVN YLRPDLKRGQ ITPHEESIIL ELHARWGNSD SNKVTNNTTT STSLVQQARQ  120
AEMGANIYPT YTEEQGNNWG CYSDNTISCE ASNVDLLCWD AALWNLDDFQ GNNWGSF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.19e-49MYB family protein