PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035444-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 190aa    MW: 21518.8 Da    PI: 9.5051
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035444-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.72.6e-1568167290
            FAR1   2 fYneYAkevGFsvrkskskks.......krngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 
                     fY +YA+e+GF+vr s++k         + +g ++ + + Cskeg+ +++kk     +    r+++++r+gC ak+k +  + g ++v+++ + H
  AUR62035444-RA  68 FYYKYANECGFKVRSSTTKVDknkvgssNGKGVTVIKYLLCSKEGYVTNNKKVgkqvEGACLRKKTVKRVGCPAKIKFRFYNGGLYMVYSFYESH 162
                     9*************99877665566764556677778899******9999998655444555699****************************** PP

            FAR1  86 nHela 90 
                     +H+++
  AUR62035444-RA 163 SHPFS 167
                     **986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MTESVEHCSG AVTDEDMDVR IFETPTQPVL PRIYYHSRGD KEYIPGCSLE NKPILEMKFD  60
SLGDGITFYY KYANECGFKV RSSTTKVDKN KVGSSNGKGV TVIKYLLCSK EGYVTNNKKV  120
GKQVEGACLR KKTVKRVGCP AKIKFRFYNG GLYMVYSFYE SHSHPFSTPI TRHVTKYEVG  180
LNFVHKFIF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-11FAR1 family protein