PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035513-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 261aa    MW: 29305.1 Da    PI: 5.726
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035513-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR135.82.6e-11117215186
            FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk..........tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 
                     +++++Y+k+ GF v++s+ +      + +e ++ t++C + g + +++kk           ++e  +r++++++C  kl  k ++ g w+++k+e
  AUR62035513-RA 117 EYFRNYGKQEGFGVVRSSGTFVgkgVNAKEKKSVTWTCECFGMPGRKSKKtgptfvsdsqISEELVKRKSKKVQCPVKLYAKVNEGGDWVIDKVE 211
                     589**************9987766677888999***********9999999***9998766666679**************************** PP

            FAR1  83 leHn 86 
                     leH 
  AUR62035513-RA 212 LEHK 215
                     ***5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MARKMLVMED PVLTDRTEDC DELFGGGSGR IFGDDVDNNA TIEDQVEHDR AEEDELEFAL  60
DALLKEVNVG EESYKTPTKG KSTVAISFEI EEFANVEVSL PPPNVGMVFD SWKKIDEYFR  120
NYGKQEGFGV VRSSGTFVGK GVNAKEKKSV TWTCECFGMP GRKSKKTGPT FVSDSQISEE  180
LVKRKSKKVQ CPVKLYAKVN EGGDWVIDKV ELEHKGHAPT PGKSKNITKF RKKFLMDNPH  240
WYWATRDLYQ VAVHHSSEIP *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.13e-09FAR1 family protein