PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035595-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 200aa    MW: 23109.8 Da    PI: 5.066
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035595-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.87.6e-18150756
                    --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    f++eq++ Le+ Fe++ ++  +++ + A++lgL+ rqV +WFqN+Ra++k
  AUR62035595-RA  1 FSDEQVKSLETIFESETKLEPRKKVQVARELGLQPRQVAIWFQNKRARWK 50
                    899**********************************************9 PP
2HD-ZIP_I/II111.36.3e-36185690
     HD-ZIP_I/II  6 lskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
                    +s+eqvk+LE+ Fe+e+kLep++Kv++areLglqprqva+WFqn+RAR+k+kq+Ek+y++Lk++yd+lk + e ++ke e+L e+
  AUR62035595-RA  1 FSDEQVKSLETIFESETKLEPRKKVQVARELGLQPRQVAIWFQNKRARWKSKQIEKNYRVLKSNYDNLKVRLEGIKKERESLLEQ 85
                    689***************************************************************************9998654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
FSDEQVKSLE TIFESETKLE PRKKVQVARE LGLQPRQVAI WFQNKRARWK SKQIEKNYRV  60
LKSNYDNLKV RLEGIKKERE SLLEQELRSL LEKSHDRKNV CKDIEANEQD MNRENGEIVA  120
GITARSSSLQ EEMDNQGALY SDDDKSGNIA YLGQEEPELL KVTEHIDGSL ISPMKWCSFD  180
AGSLFDPTST TSHWWDTWT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.29e-39HD-ZIP family protein