PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035700-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 84aa    MW: 9843.44 Da    PI: 10.7956
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035700-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.4e-12143754
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  AUR62035700-RA  1 MAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 43
                    58*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MAERRRRKRL NDRLSMLRSV VPKISKMDRT SILGDTIDYM KELLERINKL QEEIDVGSNN  60
NQLNVMSIFK DAKPNDVLVR NSPK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1310ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.26e-29bHLH family protein