PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62035935-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 397aa    MW: 44057 Da    PI: 6.5555
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62035935-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA40.53.9e-13124154129
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGly 29 
                     C++Cg ++  Tp +Rrgp g++tLCnaCGl+
  AUR62035935-RA 124 CQHCGISEndTPAMRRGPAGPRTLCNACGLM 154
                     ******999********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MVPPAELEAL LLTHPEITDT VVIPFPDENV GQFPMAYVVR KAGSNLSENE IMDFVAKQLI  60
LYQLLNLTRL GITLLLETVG ARLFCLREPT ERVLVDLEEI LLIGILSFAI RLSFRAMNQS  120
SNKCQHCGIS ENDTPAMRRG PAGPRTLCNA CGLMSLGRLS LDHTVYISGL TCAKTKHKGL  180
EARWFENGPG TSFVNLSYLP AILNSSCLHK HSYLADVSRQ NTGTHPKLKL GVFKKSSRVE  240
LASLNGEVSG VVPLWLLTEK IVHNSYPVSP AVNIEQICKV WLDQIEYCHV NTRLAHVTCG  300
HFVKTTASGS VECEFCCCNC ETKTRCTFHV KIIVADDSGK VFAWCIGQNA IELLQISPDE  360
FYELPEEEQV IYPCSLENER YMIAKLWSAG NHLQGM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.28e-13GATA family protein