PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62036063-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 205aa    MW: 21854.5 Da    PI: 5.2283
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62036063-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM28.64.1e-0966125149
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee.......vikev.diykvePwdLpk 49 
                     lp+G+rF+Ptd+e++ ++L+ kv+ ++       +           +++   +i++++P++Lp+
  AUR62036063-RA  66 LPAGVRFDPTDQEII-QHLEGKVRPNDessfhglH---PlidefipTLEGEnGICYTHPEKLPE 125
                     799************.99******99955555541...055554333444447*********93 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MTWCNEVDDV QTVEKNNSLP SSTSSRPSND NLDTKNVTAR SVKSCPSCGH QIKCQQQARI  60
NDLPGLPAGV RFDPTDQEII QHLEGKVRPN DESSFHGLHP LIDEFIPTLE GENGICYTHP  120
EKLPEVGLGG GVVWVRCGPG WWGGLGWRWA WVVGWSGLEV GLGGGVVWAR GGSGWWGGLG  180
WTWLGLVVVG FRGVGSGVGE GGVG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.12e-41NAC family protein