PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62036316-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 408aa MW: 47270.8 Da PI: 8.4554

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62036316-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.9	1.9e-19	71	154	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA++ GFs+rk k++ + ++g++ r+fvCskeg+++++ k r t++ rtgCka++ +k+g+ + ++ + +HnH+l+ AUR62036316-RA 71 LYNNYAYRFGFSIRKGKTRPR-NDGTVCAREFVCSKEGFKKQSLPK----RYTKTDFRTGCKAHVLFAVDKSGVHRCKRHVMDHNHKLV 154 7*************97775.9999**********998766....99*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MILRNLLGIE ADDARCTEFA LVDFDAEIIV EQADDHEFDS SSAVGQHVYS EADTSELLDA 60 EVKDADEAYN LYNNYAYRFG FSIRKGKTRP RNDGTVCARE FVCSKEGFKK QSLPKRYTKT 120 DFRTGCKAHV LFAVDKSGVH RCKRHVMDHN HKLVDVDKRH WLRSQRNVSK DQLDMFTSWK 180 DNGMGVSDAY RFVRKESGGF QSVGCVIKDV YNAVGKEKRK KIKGCDTKQL LKMFAERQTK 240 ETDFYYDLEL DEKGHIISFF WRDGIMKRDY ETFSDLLVFD TTYRTNKYAM ICAPFVGMNH 300 HNKNVMFGVG FLLNEKHDSF IWLYNTFLRS MGQIQPINIM TDQCQSMAKA ISVAFPNSCH 360 RLCTWHIGKN ATKNIPHLKA LKGFNSIFNY VLKYTNIEAE FEHYWAR*

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MILRNLLGIE ADDARCTEFA LVDFDAEIIV EQADDHEFDS SSAVGQHVYS EADTSELLDA  60
EVKDADEAYN LYNNYAYRFG FSIRKGKTRP RNDGTVCARE FVCSKEGFKK QSLPKRYTKT  120
DFRTGCKAHV LFAVDKSGVH RCKRHVMDHN HKLVDVDKRH WLRSQRNVSK DQLDMFTSWK  180
DNGMGVSDAY RFVRKESGGF QSVGCVIKDV YNAVGKEKRK KIKGCDTKQL LKMFAERQTK  240
ETDFYYDLEL DEKGHIISFF WRDGIMKRDY ETFSDLLVFD TTYRTNKYAM ICAPFVGMNH  300
HNKNVMFGVG FLLNEKHDSF IWLYNTFLRS MGQIQPINIM TDQCQSMAKA ISVAFPNSCH  360
RLCTWHIGKN ATKNIPHLKA LKGFNSIFNY VLKYTNIEAE FEHYWAR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-62	FAR1 family protein