PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62036514-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 749aa    MW: 86221.2 Da    PI: 9.654
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62036514-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.98.6e-12304349146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r++WT +Ed+ l+ +v++ G ++W+ Ia+++ ++Rt+ qc  r+q 
   AUR62036514-RA 304 RDNWTSDEDKHLLLLVQKNGIHNWSYIAEKLETNRTPFQCLARYQR 349
                      789*****************************************96 PP
2Myb_DNA-binding45.81.4e-14358403248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        WT++Ed +l +av+ +G  +W ++a+ +  gRt+ qc +rw+k l
   AUR62036514-RA 358 RDWTEDEDAQLRCAVESFGESNWQAVASVLE-GRTGTQCSNRWNKTL 403
                      57*****************************.************975 PP
3Myb_DNA-binding45.91.3e-14411456248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g W+  Ed++l+ av+++G ++W++Ia+ ++ gRt  qc++rw ++l
   AUR62036514-RA 411 GTWSISEDKRLKVAVTLFGHKSWHRIASFVP-GRTQAQCRERWVNVL 456
                      78*****************************.***********9975 PP
4Myb_DNA-binding54.42.8e-17462506147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg WT+e+d +l++a++++G   W+++a++++  Rt++qc+ rw  +
   AUR62036514-RA 462 RGQWTEEDDMRLIKAIQEHGYC-WSKVAACVP-LRTDNQCRRRWMRL 506
                      89******************99.*********.9**********875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 749 aa     Download sequence    
MGKYDFEEEL SGSDGDDDFL HDEIRALSMA YAMASKDDDS VDKSFHKSDA VGTSLGSEFL  60
DVHQRDFGQD TWDAAENFQN VETSSCTSSF PMSAQTFMEA IKKNRSSQKF IRSKMLHIEA  120
RMEEINDIKK RLKTLRDFQV QCKKKIGRAL SQKQDARVQL ISALKQRANT KGSEKNISAM  180
LYGPLENSHV VLYKAAMENF PLSFHREKWS KDEKQLLNKE ISNQFQKSLF NKSADAISAI  240
EESGFDNGVD GMISSIKKLE ITPEIIQDFV GKVDWNQLAS MFPRRSREEC EARWLNNENC  300
VINRDNWTSD EDKHLLLLVQ KNGIHNWSYI AEKLETNRTP FQCLARYQRS LNASILKRDW  360
TEDEDAQLRC AVESFGESNW QAVASVLEGR TGTQCSNRWN KTLLPARQRV GTWSISEDKR  420
LKVAVTLFGH KSWHRIASFV PGRTQAQCRE RWVNVLDPSL NRGQWTEEDD MRLIKAIQEH  480
GYCWSKVAAC VPLRTDNQCR RRWMRLFPND VLRLKAAKDI EKAALISNFV DRESERPTLG  540
ANDFVPLRIT DSTNRQEIEN VTQEQNKSRK SRKADQTSVS CRGPKGVRSR KCKKGDRLTT  600
YNDDDARRTN GKRRAIRSGS KERRKTRNCS LAAEPNKSRE IPELHDNSES ETFSWSAQKR  660
SILASSRVVV LARASSDRFR LQCLGHRRQH HSTYGGLLRV KLPFNSLELR LLTVEPPIKR  720
RELSLHRCES LLDDIHPHRE RGHHDRPL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.21e-163MYB family protein