PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62036523-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 299aa    MW: 33850 Da    PI: 9.7791
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62036523-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.94.1e-1285127147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+++v ++G+ +W+ Ia++++    +k+c++rw++ 
   AUR62036523-RA  85 RGHWRPAEDTKLKELVLKFGPQNWNVIAEKLQ----GKSCRLRWFNQ 127
                      899*****************************....5*******996 PP
2Myb_DNA-binding50.35.4e-16134177146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r++++ +E+e+l+ a +++G++ W+ Iar ++ gRt++ +k++w+ 
   AUR62036523-RA 134 RKPFSDDEEERLKTAQQMYGNK-WAIIARLFP-GRTDNAVKNHWHV 177
                      789*******************.*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDENMNNNSL FSLKSNSNST HPNPPALDLC LCTNTITNCQ DHENTKTGFP IRSSPSSVEG  60
MKGENCQESL VVARNVRRPS KLCSRGHWRP AEDTKLKELV LKFGPQNWNV IAEKLQGKSC  120
RLRWFNQLDP KINRKPFSDD EEERLKTAQQ MYGNKWAIIA RLFPGRTDNA VKNHWHVMQA  180
REDREKSNLF TTRKRIHNKM QPQQFYDHGR NNEFTAMIKK SSIEESMWKS AMKGNYINAL  240
AKQPKEMFPS REEFCGQSNS NSGGSGSGDS AVNSGYSTSA NANLNKLPFI NFLGLEAN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.14e-58MYB family protein