PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62036527-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 354aa MW: 38865.4 Da PI: 7.4969

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62036527-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121	4.1e-38	99	158	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grr+nk+ AUR62036527-RA 99 PDKILPCPRCNSSDTKFCYFNNYNVHQPRHFCKSCQRYWTAGGTVRNVPVGAGRRRNKHL 158 68999*****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MSKENMSVAV AVANKDSAIK LFGRTISLPE TQFLEGSEYK DNGSSFMVKK ETVELENENS 60 MQHEVVSMKQ SITSQATMKP SGYQEDSDGA GEQKQMRRPD KILPCPRCNS SDTKFCYFNN 120 YNVHQPRHFC KSCQRYWTAG GTVRNVPVGA GRRRNKHLAS QYRQVIASSD GGDTLMVEVG 180 DSANELRSCE ESSTSCTGSS PKEMFLKFGP QSPQCDSSTP NMSSNRQNNG YSQIGGINSD 240 IPSQHHLYHY IVPSQVTTSS PHSNCSVSLA VPVSATPNIS YQIVPTAYMN YIPAVWVAGS 300 ENLSLPMSNG CVSPTSGHLQ VLGKHYRDIN SSQDRRLEES LTPKILKIHV DDA*

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MSKENMSVAV AVANKDSAIK LFGRTISLPE TQFLEGSEYK DNGSSFMVKK ETVELENENS  60
MQHEVVSMKQ SITSQATMKP SGYQEDSDGA GEQKQMRRPD KILPCPRCNS SDTKFCYFNN  120
YNVHQPRHFC KSCQRYWTAG GTVRNVPVGA GRRRNKHLAS QYRQVIASSD GGDTLMVEVG  180
DSANELRSCE ESSTSCTGSS PKEMFLKFGP QSPQCDSSTP NMSSNRQNNG YSQIGGINSD  240
IPSQHHLYHY IVPSQVTTSS PHSNCSVSLA VPVSATPNIS YQIVPTAYMN YIPAVWVAGS  300
ENLSLPMSNG CVSPTSGHLQ VLGKHYRDIN SSQDRRLEES LTPKILKIHV DDA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	8e-41	Dof family protein