PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62036595-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 258aa    MW: 28892.8 Da    PI: 5.7925
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62036595-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.2e-1168109349
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAve 49 
                     r+h e+ErrRR+riN  f++Lr  lP++      K +Ka+ L +++ 
  AUR62036595-RA  68 RNHCEAERRRRERINGHFATLRNFLPSN-----DKIDKATLLAEVIS 109
                     57*************************8.....7******9998886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MDSSFLVQSQ EFPDFGLFMP NNLELHCKSL GWVGESPLSD SKMDEVVKNP DSFGKKVTSE  60
RKNSIALRNH CEAERRRRER INGHFATLRN FLPSNDKIDK ATLLAEVISQ VRVLKKQAYE  120
ASKGLLVPTD ADEVVVEPYN DEDIADGTFA FRVSVCCRYK PELIPYTRKA ISDLELTIAK  180
AEISTLEGRV KNVLIVTGYK DDNGDDKTDK FAKCIHEALC SVLQELSASE EILPTSTLPN  240
KRRKVSCFES SIWSPSL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17479ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.11e-31bHLH family protein