PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62036664-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 637aa MW: 73820.3 Da PI: 5.6192

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62036664-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.3	5e-18	135	237	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 Y+++A +GF +rk++++ +++++ +t++++vCs egkr++ +kk ++++ r+ + tr +Cka+++ k +k+g++ev + AUR62036664-RA 135 LYEKHAAILGFAIRKHTTRFKQHTKIVTEKNYVCSAEGKRHSGQKKtklvemvdeedvnvKTRKPRQVSITRSNCKACIRAKVNKEGQFEVVAHV 229 7***************************************99999*******887888888899********************* PP FAR1 83 leHnHela 90 +HnHel+ AUR62036664-RA 230 IQHNHELT 237 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MENSTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA 60 DEAIDNADEA IENAENAIHN AENQVVPDKS IDSNSEQTTK SDATEDTNPI DAYGLDLRGS 120 FVGVVRETFE EILELYEKHA AILGFAIRKH TTRFKQHTKI VTEKNYVCSA EGKRHSGQKK 180 TKLVEMVDEE DVNVKTRKPR QVSITRSNCK ACIRAKVNKE GQFEVVAHVI QHNHELTKPQ 240 WHYLHRSERK MTEEKVVTIK TMKSSGLTTM DTYNYMATEA GGEQNIGHSV VDHLNFCSRL 300 RMEQIEAGDA QTLVNILSQE QLEDPNFFFR VKFDKEGKIC NIFWRDSMML EDYRIYGDVL 360 VFDTTYRTNR YNLICAPFVG INNHWHNCMF ACAFIGDETT DSFVWLLQTF FKAMEDRKPT 420 SIFTHQDQAM ANDIMEVIPN TRHRLCIWHL EQNAITRFGA LKKDKEFKFA FNQCLKMCVT 480 EQEFEAKWQA MLQKYELTEH SWYKRVYELK DKWCPALCRD FFSAGILSSQ RSESTNHAIG 540 FRASKATTLT EFYTIFKKIT NRWRSTEKYD EFTCSKSIAF TSLPLSGMLK HAAQVFTLSL 600 FRNFEEEFGY SMATTVQMLG SNEECLLYQV TLEDKP*

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MENSTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA  60
DEAIDNADEA IENAENAIHN AENQVVPDKS IDSNSEQTTK SDATEDTNPI DAYGLDLRGS  120
FVGVVRETFE EILELYEKHA AILGFAIRKH TTRFKQHTKI VTEKNYVCSA EGKRHSGQKK  180
TKLVEMVDEE DVNVKTRKPR QVSITRSNCK ACIRAKVNKE GQFEVVAHVI QHNHELTKPQ  240
WHYLHRSERK MTEEKVVTIK TMKSSGLTTM DTYNYMATEA GGEQNIGHSV VDHLNFCSRL  300
RMEQIEAGDA QTLVNILSQE QLEDPNFFFR VKFDKEGKIC NIFWRDSMML EDYRIYGDVL  360
VFDTTYRTNR YNLICAPFVG INNHWHNCMF ACAFIGDETT DSFVWLLQTF FKAMEDRKPT  420
SIFTHQDQAM ANDIMEVIPN TRHRLCIWHL EQNAITRFGA LKKDKEFKFA FNQCLKMCVT  480
EQEFEAKWQA MLQKYELTEH SWYKRVYELK DKWCPALCRD FFSAGILSSQ RSESTNHAIG  540
FRASKATTLT EFYTIFKKIT NRWRSTEKYD EFTCSKSIAF TSLPLSGMLK HAAQVFTLSL  600
FRNFEEEFGY SMATTVQMLG SNEECLLYQV TLEDKP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-87	FAR1 family protein