PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62036716-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 675aa MW: 77751.9 Da PI: 6.6607

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62036716-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.7	2.8e-21	181	273	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHn.Hela 90 +fY+ YAk GF +r +++++sk +g+ t++++ C++eg+re ++ + +++r+++a+tr+gC+a++ k ++ ++ w+v++++ eHn H+l AUR62036716-RA 181 QFYRMYAKVKGFGIRCKHTTTSKIDGHPTSQNLWCNREGFREAKNLNrPDRKRKEKAVTRCGCNASISFKWDHrSDSWYVKDFVPEHNgHDLI 273 6**************************************9998875789999*************999************78775 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MVFADEVTVY HMDNGLTYDD NPVGGPPPGI LGDAVSQARD FIQFRIFMKR LIVTCGITQT 60 EHLIVGQPEF LKKNFMFEYM PLNENGKRVL EIAETLDDLV SNEETWTPLK FTKRSEKDTV 120 DHGEDSDNGD ESDVDTDTDT DEIPKSFLDL DVWEKLGRKL EDFTLAEMKQ LSFRSHRTCI 180 QFYRMYAKVK GFGIRCKHTT TSKIDGHPTS QNLWCNREGF REAKNLNRPD RKRKEKAVTR 240 CGCNASISFK WDHRSDSWYV KDFVPEHNGH DLIPMNQMYF ERSHREVTEG DKFCIKALMN 300 SGVKPSITMR NLAQSAGGIR EVGFLKKDLY NTCEKFKREE IKDGDTETVL AYLLGKTTSD 360 PSFFLRYTRD DHDGIDKMFW CDGICQTDYK AFGKRVNHHS KTVPLGVALI ANEKTDTYIW 420 VLEQLKEVGG NVAPYTIITD GDKAMAAAIT EVFPRAHHRL CMWHLMRNIK GHTNKRFCSG 480 FMKCVDGART PDEFEEAWED LMKSYKAVRD KKWAQDLYYD KEKWAEAFMV GQFYVDTILR 540 RWTIREKVHL KNTFKDHDFQ KRNDHASANG RYAFLTGLSA QFFRMVSSLY DQSTWGVPVI 600 GRDVHDITHV VRNVAATSET NSSPVKSGGF VELLRNFLLR TYNTGDAANA TDSYEVSAFE 660 KFPTIFDWDP NMDF*

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MVFADEVTVY HMDNGLTYDD NPVGGPPPGI LGDAVSQARD FIQFRIFMKR LIVTCGITQT  60
EHLIVGQPEF LKKNFMFEYM PLNENGKRVL EIAETLDDLV SNEETWTPLK FTKRSEKDTV  120
DHGEDSDNGD ESDVDTDTDT DEIPKSFLDL DVWEKLGRKL EDFTLAEMKQ LSFRSHRTCI  180
QFYRMYAKVK GFGIRCKHTT TSKIDGHPTS QNLWCNREGF REAKNLNRPD RKRKEKAVTR  240
CGCNASISFK WDHRSDSWYV KDFVPEHNGH DLIPMNQMYF ERSHREVTEG DKFCIKALMN  300
SGVKPSITMR NLAQSAGGIR EVGFLKKDLY NTCEKFKREE IKDGDTETVL AYLLGKTTSD  360
PSFFLRYTRD DHDGIDKMFW CDGICQTDYK AFGKRVNHHS KTVPLGVALI ANEKTDTYIW  420
VLEQLKEVGG NVAPYTIITD GDKAMAAAIT EVFPRAHHRL CMWHLMRNIK GHTNKRFCSG  480
FMKCVDGART PDEFEEAWED LMKSYKAVRD KKWAQDLYYD KEKWAEAFMV GQFYVDTILR  540
RWTIREKVHL KNTFKDHDFQ KRNDHASANG RYAFLTGLSA QFFRMVSSLY DQSTWGVPVI  600
GRDVHDITHV VRNVAATSET NSSPVKSGGF VELLRNFLLR TYNTGDAANA TDSYEVSAFE  660
KFPTIFDWDP NMDF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	231	236	RKRKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-56	FAR1 family protein