PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62037054-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 198aa    MW: 21500.8 Da    PI: 6.749
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62037054-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.15.4e-1085120137
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37 
                      rg W + Ed +l+++v ++G+ +W+ Ia++++ gR++
   AUR62037054-RA  85 RGHWRPAEDTKLKELVLKFGPQNWNVIAEKLQ-GRSG 120
                      899*****************************.**97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MDENMNNNSL FSLNSNSNST HPCPPALDLC LCTNTITNRQ DHENTNTGFP IRSSPSSVDG  60
LKGENCQESL VAARNVRRPS KLCSRGHWRP AEDTKLKELV LKFGPQNWNV IAEKLQGRSG  120
SIEESMWKSA MKGNYINILA KQPDEMFPSR VEFCGQSDSN SGGSGSGDSA VNSGYSTSAN  180
ANLNRLPFIN FLGLEAN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.17e-18MYB family protein