PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62037061-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 902aa    MW: 102742 Da    PI: 9.6525
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62037061-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.64.3e-11354399146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r++WT +Ed+ l+ ++++ G ++W+ Ia+++ ++Rt+ qc  r+q 
   AUR62037061-RA 354 RDNWTSDEDKHLLLLIQKNGIHNWSYIAEKLETNRTPFQCLARYQR 399
                      789*****************************************96 PP
2Myb_DNA-binding45.51.8e-14408453248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        WT++Ed +l +av+ +G  +W ++a+ +  gRt+ qc +rw+k l
   AUR62037061-RA 408 RDWTEDEDAQLRCAVESFGESNWQAVASVLE-GRTGTQCSNRWNKTL 453
                      57*****************************.************975 PP
3Myb_DNA-binding45.51.7e-14461506248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g W+  Ed++l+ av+++G ++W++Ia+ ++ gRt  qc++rw ++l
   AUR62037061-RA 461 GTWSISEDKRLKVAVTLFGHKSWHRIASFVP-GRTQAQCRERWVNVL 506
                      78*****************************.***********9975 PP
4Myb_DNA-binding54.72.4e-17512556147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg WT+e+d +l++a++++G   W+++a +++  Rt++qc+ rw  +
   AUR62037061-RA 512 RGQWTEEDDMRLIKAIQEHGHC-WSKVAVCVP-LRTDNQCRRRWMRL 556
                      89******************99.*********.9**********875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 902 aa     Download sequence    
MGKYDFEEEL SDSDGDDDFL HDEIRALSMA YAMARKDDNS VDKSFHKSDA VGTSLGCEFL  60
DVHQGVFGQD TWDAAENFQN VETSNCTSSF PISAQTFMEA IKKNRSSQKF IRSKMLHIEA  120
RMEEINDIKK RLKTLRDFQV QCKKKIGRAL SQKQDARVQL ISAPKQRANT KGSEKNISAM  180
LYGPLENSHV ALYKAAMENF PLSFHREKWS KDEKQLLNKE ISNQFQKSLF NKSADAVSAI  240
EESGFDNGVD GMISSIKKLE ITPEIIQDFV GKVDWNQLAS MFPRRSREEC EARFMLSFNK  300
NLSMPSRQAS EGGSQIASTL LGAVLSRRCQ KTWRLGRLYQ DARWLNNENC VINRDNWTSD  360
EDKHLLLLIQ KNGIHNWSYI AEKLETNRTP FQCLARYQRS LNASILKRDW TEDEDAQLRC  420
AVESFGESNW QAVASVLEGR TGTQCSNRWN KTLLPARQRV GTWSISEDKR LKVAVTLFGH  480
KSWHRIASFV PGRTQAQCRE RWVNVLDPSL NRGQWTEEDD MRLIKAIQEH GHCWSKVAVC  540
VPLRTDNQCR RRWMRLFPND VLRLKAAKDI EKAALISNFV DRESERPTLG ANDFVPLRIT  600
DSTNRQEIEN VTQEQSKSRK SRKSRKADPT SVSCHGPKGV RSRKCKKGDR LTTHNDDCDD  660
ARRANEKRRA IRSGSKERRK TRNCSLAAEP NKSREIPELH DNSESETLNI PIRIRSSRLR  720
GVRSKEVALI SHCGGSQATG IHDTGMNVAT LVHSSSQDNV SEMLDGQSTL SDLLLRIREE  780
QVEMSNIVPK TKKRRFSKLQ PRRISLAKTN LGDNNCEAME LRTSDDGNET LPKDSACSSK  840
ENAVTKQKKR KLRLDQSVGW EELPLAVIFR RNVTRIERRI SSDNIHVLSD ILTTSTVAAL  900
D*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1789795PKTKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.21e-152MYB family protein