PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62037317-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 352aa MW: 40102.7 Da PI: 4.9985

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62037317-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.2	8e-18	97	144	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++v+ +G g+W++ a+ g++Rt+k+c++rw++yl AUR62037317-RA 97 RGPWTLEEDNLLIHYVACHGEGRWNLLAKSAGLKRTGKSCRLRWLNYL 144 89********************************************97 PP
2	Myb_DNA-binding	50.1	6.2e-16	150	193	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ +t+E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ AUR62037317-RA 150 RGNLSTQEQLLILELHSKWGNR-WSKIAAHLP-GRTDNEIKNYWRT 193 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MSFQRDESEG LGIEGTTGLE WDPVEDDSDT EITLPKRMAE EKKETDESTV KQGQLRRHHH 60 HCLSLCLLEL RMPLCEGLLS IELMNGSADQ ESEELRRGPW TLEEDNLLIH YVACHGEGRW 120 NLLAKSAGLK RTGKSCRLRW LNYLKPDIKR GNLSTQEQLL ILELHSKWGN RWSKIAAHLP 180 GRTDNEIKNY WRTRVQKQAR QLNMESNSQS FMDAIRCFYM PRLVQKIEQN STEHTTPNAD 240 HCDHVAASSH IIPSSTKLED MNFDSTKDTS SSNTSLSSVP EFQDQPTNSK GSSSVVLDDI 300 HCVNSCNYDM DLGSGCHMDG NDWLDNDMAG DGMWDLDELW QFRKYEKDVG I*

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MSFQRDESEG LGIEGTTGLE WDPVEDDSDT EITLPKRMAE EKKETDESTV KQGQLRRHHH  60
HCLSLCLLEL RMPLCEGLLS IELMNGSADQ ESEELRRGPW TLEEDNLLIH YVACHGEGRW  120
NLLAKSAGLK RTGKSCRLRW LNYLKPDIKR GNLSTQEQLL ILELHSKWGN RWSKIAAHLP  180
GRTDNEIKNY WRTRVQKQAR QLNMESNSQS FMDAIRCFYM PRLVQKIEQN STEHTTPNAD  240
HCDHVAASSH IIPSSTKLED MNFDSTKDTS SSNTSLSSVP EFQDQPTNSK GSSSVVLDDI  300
HCVNSCNYDM DLGSGCHMDG NDWLDNDMAG DGMWDLDELW QFRKYEKDVG I*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68320.1	2e-88	MYB family protein