PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62037478-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 242aa MW: 27617.8 Da PI: 5.3795

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62037478-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.1	1.2e-55	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k++l e+i+e+d+y++ePw+Lp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWk+tgkd++v AUR62037478-RA 6 LPPGFRFHPTDEELVAYYLKRKINGHKIDL-EIIPEIDLYQFEPWELPsKsLLPSNDLEWYFFSPRDRKYPNGSRTNRATKAGYWKSTGKDRKVN 99 79**************************.99***********5334455677*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + ++vg+kktLv+y+grap+g+++dWvmheyrl AUR62037478-RA 100 S-QMRAVGMKKTLVYYQGRAPNGHRSDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MAPVALPPGF RFHPTDEELV AYYLKRKING HKIDLEIIPE IDLYQFEPWE LPSKSLLPSN 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK STGKDRKVNS QMRAVGMKKT LVYYQGRAPN 120 GHRSDWVMHE YRLDEGECEI PSGLQDAYAL CRVFKKTSIN ISNNIASSSQ EHSFTNIVQI 180 SSDQSSSIDM YTEGRCEDFE SSDYSIPIER CSTSATHGSS SSLCDIGDGQ WMQYLNEDEF 240 C*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-94	NAC family protein