PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62037757-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

ARF

Protein Properties

Length: 613aa MW: 67991.9 Da PI: 7.7843

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62037757-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.7	1.1e-23	123	224	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g +W++++iyr++++r++lt+GW++Fv++++L +gD++vF + + AUR62037757-RA 123 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILAKDVHGVTWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLR--AD 213 89**************************986445444..8999*****************************************4..37 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r AUR62037757-RA 214 NGDLFVGIRRP 224 7888**985 PP
2	Auxin_resp	111.1	1.1e-36	276	359	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eF vk+ v++a++v++++G Rfkmafetedss++++ +Gt+++v+ +dp++WpnS+Wr+L+ AUR62037757-RA 276 AANLAASGKAFEVVYYPRASTPEFFVKTGAVRAAMQVQWCAGIRFKMAFETEDSSRISWfMGTISSVQVVDPIHWPNSPWRLLQ 359 7899******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MINVMNPSKE SMKEVESCLD RQLWHSCAGG MVQMPEINSR VIYFPQGHIE HAQVNSIDLK 60 NYPKIPPLIP CRISGIKYLA NQENDEVYAK IRLAPLRGND FDDEDGFIGS NYDMEGSEKP 120 ASFAKTLTQS DANNGGGFSV PRYCAETIFP RLDYSAEPPV QTILAKDVHG VTWKFRHIYR 180 GTPRRHLLTT GWSNFVNQKK LVAGDSIVFL RADNGDLFVG IRRPKREILH CGGSSYGGGF 240 GAFLRSDENR LARNFEGIGS NSGNNEKLRA ESVVEAANLA ASGKAFEVVY YPRASTPEFF 300 VKTGAVRAAM QVQWCAGIRF KMAFETEDSS RISWFMGTIS SVQVVDPIHW PNSPWRLLQV 360 AWDEPDLLQN VKRVNPWSVE SVTNMPQIHM SPFSPPRKKL RLHQVPEIPF ADQLHMPAFP 420 SRAYGPNGSL FGLAEVPAGV QGARHAHFRQ FLSDHINKVN YSSLLSNGPE LKYHHGGFSA 480 KKPIVRENLS SFLTMATLQE SPKENDMPTP KFMLFGKPIL TKQQISESSS SDSARTASDS 540 NADRMGNSSD DCNDTSLNKS SGEGFPCKVF MDSEDVGRTL SLSALGSCDG LYKKIAQHVW 600 QGKVLEAEQC AL*

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MINVMNPSKE SMKEVESCLD RQLWHSCAGG MVQMPEINSR VIYFPQGHIE HAQVNSIDLK  60
NYPKIPPLIP CRISGIKYLA NQENDEVYAK IRLAPLRGND FDDEDGFIGS NYDMEGSEKP  120
ASFAKTLTQS DANNGGGFSV PRYCAETIFP RLDYSAEPPV QTILAKDVHG VTWKFRHIYR  180
GTPRRHLLTT GWSNFVNQKK LVAGDSIVFL RADNGDLFVG IRRPKREILH CGGSSYGGGF  240
GAFLRSDENR LARNFEGIGS NSGNNEKLRA ESVVEAANLA ASGKAFEVVY YPRASTPEFF  300
VKTGAVRAAM QVQWCAGIRF KMAFETEDSS RISWFMGTIS SVQVVDPIHW PNSPWRLLQV  360
AWDEPDLLQN VKRVNPWSVE SVTNMPQIHM SPFSPPRKKL RLHQVPEIPF ADQLHMPAFP  420
SRAYGPNGSL FGLAEVPAGV QGARHAHFRQ FLSDHINKVN YSSLLSNGPE LKYHHGGFSA  480
KKPIVRENLS SFLTMATLQE SPKENDMPTP KFMLFGKPIL TKQQISESSS SDSARTASDS  540
NADRMGNSSD DCNDTSLNKS SGEGFPCKVF MDSEDVGRTL SLSALGSCDG LYKKIAQHVW  600
QGKVLEAEQC AL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein