PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62037878-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 451aa MW: 49146.2 Da PI: 6.2307

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62037878-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.3	7e-28	193	247	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k++++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++ AUR62037878-RA 193 KTKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 247 6799***************.******************************86 PP
2	Myb_DNA-binding	39.5	1.3e-12	196	245	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ AUR62037878-RA 196 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 245 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MLAISPLRSN KDGNNKGGTM EANFSMGTDD FPDFSGTNLL DSIDFDELFM GMHDGDVLPD 60 LEMDPELLAD FSISTGEDES SEFNNSSSAM SVEHIISPND DGNIASFEAS YEGNYDVVSQ 120 VLETSMEGMD KDDDGCGLKT LEKEGIEGKK DVKSESTTST ISSSKESNNM KKSSSSSSKS 180 GGNNNSNHQG KRKTKVDWTP ELHRRFVQAV EQLGVDKAVP SRILELMGID CLTRHNIASH 240 LQKYRSHRKH LLAREAEAAS WTQKRQMYGV AMGGGGKGGA NISPWYPPTM GFPPMTTAMH 300 PPFRPLHVWG HPTMNPQARL HLWPKQVAPP STTPLPPTWA PPPHPPPPTD PSFWHSAHQR 360 RVGVAPVQGI LPHTMYRPDQ QGLRPPPATQ SGPHSSFDLH PSKESIDSAI GDVLAKPWLP 420 LPIGLKPPSM DSVMVELQRQ GIPKIPPSCA *

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MLAISPLRSN KDGNNKGGTM EANFSMGTDD FPDFSGTNLL DSIDFDELFM GMHDGDVLPD  60
LEMDPELLAD FSISTGEDES SEFNNSSSAM SVEHIISPND DGNIASFEAS YEGNYDVVSQ  120
VLETSMEGMD KDDDGCGLKT LEKEGIEGKK DVKSESTTST ISSSKESNNM KKSSSSSSKS  180
GGNNNSNHQG KRKTKVDWTP ELHRRFVQAV EQLGVDKAVP SRILELMGID CLTRHNIASH  240
LQKYRSHRKH LLAREAEAAS WTQKRQMYGV AMGGGGKGGA NISPWYPPTM GFPPMTTAMH  300
PPFRPLHVWG HPTMNPQARL HLWPKQVAPP STTPLPPTWA PPPHPPPPTD PSFWHSAHQR  360
RVGVAPVQGI LPHTMYRPDQ QGLRPPPATQ SGPHSSFDLH PSKESIDSAI GDVLAKPWLP  420
LPIGLKPPSM DSVMVELQRQ GIPKIPPSCA *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	1e-75	G2-like family protein