PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62037903-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 225aa    MW: 26094.6 Da    PI: 9.2683
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62037903-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.29.1e-2168122256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     + ++++t++qle Le+ F+++r+++ +++ +LA++lgL+ rqV vWFqNrRa++k
  AUR62037903-RA  68 KMKRRLTTNQLESLESSFHEERKLDPDRKMRLARELGLQPRQVAVWFQNRRARWK 122
                     567799************************************************9 PP
2HD-ZIP_I/II116.91.1e-3769160293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                      krrl+++q+++LE+sF+ee+kL+p+rK++lareLglqprqvavWFqnrRAR+k+k+lE+ y+aLk +++ +++e+++L++ev++L++ lke
  AUR62037903-RA  69 MKRRLTTNQLESLESSFHEERKLDPDRKMRLARELGLQPRQVAVWFQNRRARWKAKKLEHLYDALKLEFEVVTKEKQKLQEEVQKLKSMLKE 160
                     59*************************************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDWNTKILRS TPEISSTNSL YNSCNQYDRF SGLEVMKHHG AVEMMTANVI PSNMERDMVM  60
MSFGNQEKMK RRLTTNQLES LESSFHEERK LDPDRKMRLA RELGLQPRQV AVWFQNRRAR  120
WKAKKLEHLY DALKLEFEVV TKEKQKLQEE VQKLKSMLKE QATKKQVYSS YTEASCEETV  180
ESTSAAVANQ NKSIGREHNK EGHFLFNVDN YNAISSPSYW GSLA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.11e-37HD-ZIP family protein