PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038049-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 194aa    MW: 21229.8 Da    PI: 5.223
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038049-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.21.9e-05941321255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  AUR62038049-RA  94 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 132
                     7788999*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MSSPISSSSS TIDPQMANNA QNGSPRFNVD HDLQQSNDLK LCNIPNNNLS SFNNNNGVPA  60
DSKNYIMEQQ STHQMPSKKP RFEPRASCPP FKVRKEKLGD RIAALQQLVA PFGKTDTASV  120
LMEAIGYIKF LQNQVEVKDD EFCVSDESIL TDDLRSRGLC LVPQSCMSYI NLASDATING  180
GIWPSPNFNP AGF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.15e-40bHLH family protein